summaryrefslogtreecommitdiff
path: root/src/main/java/org/apache/commons/math/genetics/BinaryMutation.java
diff options
context:
space:
mode:
Diffstat (limited to 'src/main/java/org/apache/commons/math/genetics/BinaryMutation.java')
-rw-r--r--src/main/java/org/apache/commons/math/genetics/BinaryMutation.java52
1 files changed, 52 insertions, 0 deletions
diff --git a/src/main/java/org/apache/commons/math/genetics/BinaryMutation.java b/src/main/java/org/apache/commons/math/genetics/BinaryMutation.java
new file mode 100644
index 0000000..f762f89
--- /dev/null
+++ b/src/main/java/org/apache/commons/math/genetics/BinaryMutation.java
@@ -0,0 +1,52 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.commons.math.genetics;
+
+import java.util.ArrayList;
+import java.util.List;
+
+/**
+ * Mutation for {@link BinaryChromosome}s. Randomly changes one gene.
+ *
+ * @version $Revision: 811685 $ $Date: 2009-09-05 19:36:48 +0200 (sam. 05 sept. 2009) $
+ * @since 2.0
+ */
+public class BinaryMutation implements MutationPolicy {
+
+ /**
+ * Mutate the given chromosome. Randomly changes one gene.
+ * @param original the original chromosome.
+ * @return the mutated chromomsome.
+ */
+ public Chromosome mutate(Chromosome original) {
+ if (!(original instanceof BinaryChromosome)) {
+ throw new IllegalArgumentException("Binary mutation works on BinaryChromosome only.");
+ }
+
+ BinaryChromosome origChrom = (BinaryChromosome) original;
+ List<Integer> newRepr = new ArrayList<Integer>(origChrom.getRepresentation());
+
+ // randomly select a gene
+ int geneIndex = GeneticAlgorithm.getRandomGenerator().nextInt(origChrom.getLength());
+ // and change it
+ newRepr.set(geneIndex, origChrom.getRepresentation().get(geneIndex) == 0 ? 1 : 0);
+
+ Chromosome newChrom = origChrom.newFixedLengthChromosome(newRepr);
+ return newChrom;
+ }
+
+}