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+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.commons.math.genetics;
+
+import java.util.ArrayList;
+import java.util.Iterator;
+import java.util.List;
+
+import org.apache.commons.math.exception.util.LocalizedFormats;
+import org.apache.commons.math.exception.NotPositiveException;
+import org.apache.commons.math.exception.NumberIsTooLargeException;
+
+/**
+ * Population of chromosomes represented by a {@link List}.
+ *
+ * @since 2.0
+ * @version $Revision: 983921 $ $Date: 2010-08-10 12:46:06 +0200 (mar. 10 août 2010) $
+ */
+public abstract class ListPopulation implements Population {
+
+ /** List of chromosomes */
+ private List<Chromosome> chromosomes;
+
+ /** maximial size of the population */
+ private int populationLimit;
+
+
+ /**
+ * Creates a new ListPopulation instance.
+ *
+ * @param chromosomes list of chromosomes in the population
+ * @param populationLimit maximal size of the population
+ */
+ public ListPopulation (List<Chromosome> chromosomes, int populationLimit) {
+ if (chromosomes.size() > populationLimit) {
+ throw new NumberIsTooLargeException(LocalizedFormats.LIST_OF_CHROMOSOMES_BIGGER_THAN_POPULATION_SIZE,
+ chromosomes.size(), populationLimit, false);
+ }
+ if (populationLimit < 0) {
+ throw new NotPositiveException(LocalizedFormats.POPULATION_LIMIT_NOT_POSITIVE, populationLimit);
+ }
+
+ this.chromosomes = chromosomes;
+ this.populationLimit = populationLimit;
+ }
+
+ /**
+ * Creates a new ListPopulation instance and initializes its inner
+ * chromosome list.
+ *
+ * @param populationLimit maximal size of the population
+ */
+ public ListPopulation (int populationLimit) {
+ if (populationLimit < 0) {
+ throw new NotPositiveException(LocalizedFormats.POPULATION_LIMIT_NOT_POSITIVE, populationLimit);
+ }
+ this.populationLimit = populationLimit;
+ this.chromosomes = new ArrayList<Chromosome>(populationLimit);
+ }
+
+ /**
+ * Sets the list of chromosomes.
+ * @param chromosomes the list of chromosomes
+ */
+ public void setChromosomes(List<Chromosome> chromosomes) {
+ this.chromosomes = chromosomes;
+ }
+
+ /**
+ * Access the list of chromosomes.
+ * @return the list of chromosomes
+ */
+ public List<Chromosome> getChromosomes() {
+ return chromosomes;
+ }
+
+ /**
+ * Add the given chromosome to the population.
+ * @param chromosome the chromosome to add.
+ */
+ public void addChromosome(Chromosome chromosome) {
+ this.chromosomes.add(chromosome);
+ }
+
+ /**
+ * Access the fittest chromosome in this population.
+ * @return the fittest chromosome.
+ */
+ public Chromosome getFittestChromosome() {
+ // best so far
+ Chromosome bestChromosome = this.chromosomes.get(0);
+ for (Chromosome chromosome : this.chromosomes) {
+ if (chromosome.compareTo(bestChromosome) > 0) {
+ // better chromosome found
+ bestChromosome = chromosome;
+ }
+ }
+ return bestChromosome;
+ }
+
+ /**
+ * Access the maximum population size.
+ * @return the maximum population size.
+ */
+ public int getPopulationLimit() {
+ return this.populationLimit;
+ }
+
+ /**
+ * Sets the maximal population size.
+ * @param populationLimit maximal population size.
+ */
+ public void setPopulationLimit(int populationLimit) {
+ this.populationLimit = populationLimit;
+ }
+
+ /**
+ * Access the current population size.
+ * @return the current population size.
+ */
+ public int getPopulationSize() {
+ return this.chromosomes.size();
+ }
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ public String toString() {
+ return this.chromosomes.toString();
+ }
+
+ /**
+ * Chromosome list iterator
+ *
+ * @return chromosome iterator
+ */
+ public Iterator<Chromosome> iterator() {
+ return chromosomes.iterator();
+ }
+}