1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
|
#!/usr/bin/env python
# Copyright 2015-2016 ARM Limited
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
"""This is a script to publish a notebook containing Ipython graphs
The static data is published as an anonymous gist. GitHub does not
allow easy deletions of anonymous gists.
"""
import os
import argparse
from IPython.nbformat.sign import TrustNotebookApp
from argparse import RawTextHelpFormatter
# Logging Configuration
import logging
from trappy.plotter import IPythonConf
logging.basicConfig(level=logging.INFO)
def change_resource_paths(txt):
"""Change the resource paths from local to
Web URLs
"""
# Replace the path for d3-tip
txt = txt.replace(
IPythonConf.add_web_base("plotter_scripts/EventPlot/d3.tip.v0.6.3"),
IPythonConf.D3_TIP_URL)
txt = txt.replace(
IPythonConf.add_web_base("plotter_scripts/EventPlot/d3.v3.min"),
IPythonConf.D3_PLOTTER_URL)
txt = txt.replace(
IPythonConf.add_web_base("plotter_scripts/EventPlot/EventPlot"),
"https://rawgit.com/sinkap/7f89de3e558856b81f10/raw/46144f8f8c5da670c54f826f0c634762107afc66/EventPlot")
txt = txt.replace(
IPythonConf.add_web_base("plotter_scripts/ILinePlot/synchronizer"),
IPythonConf.DYGRAPH_SYNC_URL)
txt = txt.replace(
IPythonConf.add_web_base("plotter_scripts/ILinePlot/dygraph-combined"),
IPythonConf.DYGRAPH_COMBINED_URL)
txt = txt.replace(
IPythonConf.add_web_base("plotter_scripts/ILinePlot/ILinePlot"),
"https://rawgit.com/sinkap/648927dfd6985d4540a9/raw/69d6f1f9031ae3624c15707315ce04be1a9d1ac3/ILinePlot")
txt = txt.replace(
IPythonConf.add_web_base("plotter_scripts/ILinePlot/underscore-min"),
IPythonConf.UNDERSCORE_URL)
logging.info("Updated Library Paths...")
return txt
def publish(source, target):
"""Publish the notebook for globally viewable interactive
plots
"""
txt = ""
with open(source, 'r') as file_fh:
txt = change_resource_paths(file_fh.read())
with open(target, 'w') as file_fh:
file_fh.write(txt)
trust = TrustNotebookApp()
trust.sign_notebook(target)
logging.info("Signed and Saved: %s", target)
def main():
"""Command Line Invocation Routine"""
parser = argparse.ArgumentParser(description="""
The data for the interactive plots is stored in the ipython profile.
In order to make it accessible when the notebook is published or shared,
a github gist of the data is created and the links in the notebook are
updated. The library links are also updated to their corresponding publicly
accessible URLs.
""",
prog="publish_interactive_plots.py", formatter_class=RawTextHelpFormatter)
parser.add_argument(
"-p",
"--profile",
help="ipython profile",
default="default",
type=str)
parser.add_argument(
"-o",
"--outfile",
help="name of the output notebook",
default="",
type=str)
parser.add_argument("notebook")
args = parser.parse_args()
notebook = args.notebook
outfile = args.outfile
if outfile == "":
outfile = "published_" + os.path.basename(notebook)
logging.info("Setting outfile as %s", outfile)
elif not outfile.endswith(".ipynb"):
outfile += ".ipynb"
publish(notebook, outfile)
if __name__ == "__main__":
main()
|
