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Diffstat (limited to 'src/main/java/org/apache/commons/math3/genetics/AbstractListChromosome.java')
-rw-r--r-- | src/main/java/org/apache/commons/math3/genetics/AbstractListChromosome.java | 119 |
1 files changed, 119 insertions, 0 deletions
diff --git a/src/main/java/org/apache/commons/math3/genetics/AbstractListChromosome.java b/src/main/java/org/apache/commons/math3/genetics/AbstractListChromosome.java new file mode 100644 index 0000000..60d09c7 --- /dev/null +++ b/src/main/java/org/apache/commons/math3/genetics/AbstractListChromosome.java @@ -0,0 +1,119 @@ +/* + * Licensed to the Apache Software Foundation (ASF) under one or more + * contributor license agreements. See the NOTICE file distributed with + * this work for additional information regarding copyright ownership. + * The ASF licenses this file to You under the Apache License, Version 2.0 + * (the "License"); you may not use this file except in compliance with + * the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + */ +package org.apache.commons.math3.genetics; + +import java.util.ArrayList; +import java.util.Arrays; +import java.util.Collections; +import java.util.List; + +/** + * Chromosome represented by an immutable list of a fixed length. + * + * @param <T> type of the representation list + * @since 2.0 + */ +public abstract class AbstractListChromosome<T> extends Chromosome { + + /** List representing the chromosome */ + private final List<T> representation; + + /** + * Constructor, copying the input representation. + * + * @param representation inner representation of the chromosome + * @throws InvalidRepresentationException iff the <code>representation</code> can not represent + * a valid chromosome + */ + public AbstractListChromosome(final List<T> representation) + throws InvalidRepresentationException { + this(representation, true); + } + + /** + * Constructor, copying the input representation. + * + * @param representation inner representation of the chromosome + * @throws InvalidRepresentationException iff the <code>representation</code> can not represent + * a valid chromosome + */ + public AbstractListChromosome(final T[] representation) throws InvalidRepresentationException { + this(Arrays.asList(representation)); + } + + /** + * Constructor. + * + * @param representation inner representation of the chromosome + * @param copyList if {@code true}, the representation will be copied, otherwise it will be + * referenced. + * @since 3.3 + */ + public AbstractListChromosome(final List<T> representation, final boolean copyList) { + checkValidity(representation); + this.representation = + Collections.unmodifiableList( + copyList ? new ArrayList<T>(representation) : representation); + } + + /** + * Asserts that <code>representation</code> can represent a valid chromosome. + * + * @param chromosomeRepresentation representation of the chromosome + * @throws InvalidRepresentationException iff the <code>representation</code> can not represent + * a valid chromosome + */ + protected abstract void checkValidity(List<T> chromosomeRepresentation) + throws InvalidRepresentationException; + + /** + * Returns the (immutable) inner representation of the chromosome. + * + * @return the representation of the chromosome + */ + protected List<T> getRepresentation() { + return representation; + } + + /** + * Returns the length of the chromosome. + * + * @return the length of the chromosome + */ + public int getLength() { + return getRepresentation().size(); + } + + /** + * Creates a new instance of the same class as <code>this</code> is, with a given <code> + * arrayRepresentation</code>. This is needed in crossover and mutation operators, where we need + * a new instance of the same class, but with different array representation. + * + * <p>Usually, this method just calls a constructor of the class. + * + * @param chromosomeRepresentation the inner array representation of the new chromosome. + * @return new instance extended from FixedLengthChromosome with the given arrayRepresentation + */ + public abstract AbstractListChromosome<T> newFixedLengthChromosome( + final List<T> chromosomeRepresentation); + + /** {@inheritDoc} */ + @Override + public String toString() { + return String.format("(f=%s %s)", getFitness(), getRepresentation()); + } +} |